Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015880120.1_cds_XP_016437403.1_33168
CDS Infomation

[gene=LOC107763425] [db_xref=GeneID:107763425] [protein=LL-diaminopimelate aminotransferase, chloroplastic-like] [protein_id=XP_016437403.1] [location=complement(join(16857..17150,17258..17464,18740..19060,19437..19487,19585..19734,20641..20757,21203..21270,21699..21772,22697..22779))] [gbkey=CDS]
Sequence

ATGGCTGCTATTCAGCAAAGTCTTTCCACTTCAATCTCATCATCAACTTCTACTTTCTTG
GGTCAGCACAAACTCCGTCTCAGGAGCCAGAATGTGTCACTGCCAGGCAAAACCGGTGGT
ATTGTCAGATGTGTTGCAACACCCTCTAAAGAGACTTCTTACAAGACAAAGGTCTCTCGC
AATGAGAACTTAGCTAAACTTCAAGCTGGTTATCTTTTTCCTGAGATCGCAAGAAGGAGA
TCTGCACACATGTTGAAACACCCTGATGCTCAAATTATAAGCCTTGGAATTGGTGACACT
ACTGAGCCCATTCCTGAATTCATAAGTTCTGCCATGGCACAGTCAGCTGTCAGAATTAAC
GGCGTTGAATTTTTTCCGCATGAGCAGCAACTTAGAGCCTCCATTGCTTCTACCTTTTAT
GCAAATGTTGGAATAGAGGAAGATGAGATCTTCGTCTCTGATGGTGCCAAAAGTGATATA
TCTCGGCTTCAGGTTCTTTTTGGGTCTAATGTGACTATGGCTGTGCAAGACCCATCATAT
CCGGCTTATGTGGATTCAAGTGTTATTATGGGCCAAACTGGTCAGTTTCAGAAGGATGTG
GAGAAGTATGGGAATATTGCGTACATGAGATGTACTCCAGAAAATGGGTTCTTTCCTGAT
TTATCCAGTGTTCCTCGGACAGATATTATATTTTTCTGTTCGCCTAATAATCCAACTGGT
GCTGCGGCATCAAGGGAGCAGCTAACTAAATTGGTGCGATTTGCTAAAAGCAATGGCTCA
ATCCTTGTTTATGATTCCGCATATGCAATGTATATATGTGATGACAGTCCAAAGTCCATC
TTTGAGATTCCTGGAGCCAAAGAGGTTGCCATTGAGGTTTCGTCGTTTTCGAAGTATGCT
GGGTTCACAGGAGTTCGTTTAGGGTGGACTGCAATTCCCAAAGTGCTCCTATATTCTGAT
GGATTTCCTGTAGCAAAAGACTTCAATCGCATTGTTTGTACAAGCTTCAATGGTGCATCC
AATATCGCTCAAGCTGGCGGCCTGGCTTGCCTTTCACCTGATGGTTTCAAGGCCATGAAG
GACGTGGTTAGTTTCTATAAAGAAAACACAGAAATCATAATGGAGACATTTAAGTCACTA
GGTTACAAGGTGTATGGAGGTAAAAATGCACCCTACGTGTGGGTTCACTTCCCTGGACGA
AGCTCATGGGAGGTTTTCAGCGAGATACTTGAGAAGACTCATGTTGTTACCACACCAGGC
AGTGGTTTTGGACCGGGCGGTGAAGGTTTTGTCAGAGTAAGTGCTTTTGGGCACCGGGAG
AATGTCGTAGAAGCTTGCAGAAGATTCAAGGAATTGTACAAGTGA

Peptide Sequence

PEP ID

XP_016437403.1
PEP Infomation

PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Nicotiana tabacum]
Sequence

MAAIQQSLSTSISSSTSTFLGQHKLRLRSQNVSLPGKTGGIVRCVATPSKETSYKTKVSR
NENLAKLQAGYLFPEIARRRSAHMLKHPDAQIISLGIGDTTEPIPEFISSAMAQSAVRIN
GVEFFPHEQQLRASIASTFYANVGIEEDEIFVSDGAKSDISRLQVLFGSNVTMAVQDPSY
PAYVDSSVIMGQTGQFQKDVEKYGNIAYMRCTPENGFFPDLSSVPRTDIIFFCSPNNPTG
AAASREQLTKLVRFAKSNGSILVYDSAYAMYICDDSPKSIFEIPGAKEVAIEVSSFSKYA
GFTGVRLGWTAIPKVLLYSDGFPVAKDFNRIVCTSFNGASNIAQAGGLACLSPDGFKAMK
DVVSFYKENTEIIMETFKSLGYKVYGGKNAPYVWVHFPGRSSWEVFSEILEKTHVVTTPG
SGFGPGGEGFVRVSAFGHRENVVEACRRFKELYK

Transcript Sequence

Gene sequence data has not been registered.